Sequence File Formats
DNA sequence files must be in plain ASCII format. No HTML, Word.doc or .rtf formats are allowed.
The input file can be in GenBank or FASTA format, as well as a simple text format. Both lower case and caps are allowed, a comment line starting with a > is ignored. Please look at the examples below.
GenBank format :
1 aagcctaact cttttgaatc tatttttcca tttttcgttt tgaaaaaaat atgccgtaat
61 tcttcctaaa tcgtcttatt ttgcgtgttt tggtctgttc cttgtcattg tcctagaaat
121 tatttaaaat gcaatacaag ccaatctgtg agcttaaagg ggtattatat agcagggcgt
181 acttcatcaa caaccaaaca aaaaaaccac tcttgattga gtggcgtgta aatgaagaga
241 tacctcactt ttctatttta ttaaattttg ttcattgata gtttcaattg cttttttaac
301 ttgttcaggt ttaccagtta taactaactt tatttcatct ttacgttcgg cgtgtttctt
361 tcctacttta attaagtacc aactgtacaa gatgaatgac acaatataaa taacgtatac
421 tatttttaca cctccgtcat ttcttctaac gtttcttcta ctgttttatg taagtcgtag
481 tagaatacac cagtataatg tttgtcttct tctttggtcc aattttcata atcggtatct
541 tccatgattt cgttgaccat ttcagaatgt tcgtttaggt tagtcacaag aatttcaacg
601 gcttttacag aggctttgtg ccattttgcc gtgaattcgt acgctttgac aacttcttga
661 agcatactga acaagtcaat gtattgggct tcagcataag cgtggacttg actttcatct
721 tttggaaaat gttcatctac ttttttatca tgtaatttca aagtgtcact aagcaattca
781 atttggtttt ttaatttcat ttttttattt ctctctttct ttttacactt gcattccagt
841 taatttgttt aagtatttcg ttttgcggtc ga
//
FASTA format :
>gi|1146276|gb|L48605.1|C2PVCG Bacteriophage c2 complete genome
AAGCCTAACTCTTTTGAATCTATTTTTCCATTTTTCGTTTTGAAAAAAATATGCCGTAATTCTTCCTAAA
TCGTCTTATTTTGCGTGTTTTGGTCTGTTCCTTGTCATTGTCCTAGAAATTATTTAAAATGCAATACAAG
CCAATCTGTGAGCTTAAAGGGGTATTATATAGCAGGGCGTACTTCATCAACAACCAAACAAAAAAACCAC
TCTTGATTGAGTGGCGTGTAAATGAAGAGATACCTCACTTTTCTATTTTATTAAATTTTGTTCATTGATA
GTTTCAATTGCTTTTTTAACTTGTTCAGGTTTACCAGTTATAACTAACTTTATTTCATCTTTACGTTCGG
CGTGTTTCTTTCCTACTTTAATTAAGTACCAACTGT
Simple text format :
AAGCCTaaCTCTTTTgaaTCTATTTTTccaTTTTTCGTTTTGaaaaaaaTATGCCGTAATTCTTCCTAAA
TCGTCTTATTTTGCGTGTTTTGGTCTGTTCCTTGTCATTGTCCTAGAAATTATTTAAAATGCAATACAAG
CCAATCTGTGAGCTTAAAGGGGTATTATATAGCAGGGCGTACTTCATCAACAACCAAACAAAAAAACCAC
TCTTGATTGAGTGGCGTGTaaaTGAAGAGATACCTCACTTTTCTATTTTATTAAATTTTGTTCATTGATA
GTTTCAATTGCTTTTTTAACTTGTTCAGGTTTACCAGTTATAACTAACTTTATTTCATCTTTACGTTCGG
CGTGTTTCTTTCCTACTTTA